Query by Gene ID:
  Example query  Gene filtering view  

Current p-value threshold for Up/down-expression output

Query by GO term description:
  
 
 
Mouse TF bindingHuman TF bindingMouse
RNAi
knockdown
Human
RNAi
knockdown
Human
addition of proteins
Gene DescriptionLinks
Pub

L
o
h

O
C
T
4
Pub

L
o
h

N
A
N
O
G
Pub

C
h
e
n

O
C
T
4
Pub

C
h
e
n

N
-
M
Y
C
Pub

C
h
e
n

S
O
X
2
Pub

C
h
e
n

S
T
A
T
3
Pub

C
h
e
n

S
U
Z
1
2
Pub

C
h
e
n

K
L
F
4
Pub

C
h
e
n

Z
F
X
Pub

C
h
e
n

T
C
F
C
P
2
L
1
Pub

C
h
e
n

S
M
A
D
1
Pub

C
h
e
n

C
T
C
F
Pub

C
h
e
n

E
2
F
1
Pub

C
h
e
n

C
-
M
Y
C
Pub

C
h
e
n

E
S
R
R
B
Pub

C
h
e
n

N
A
N
O
G
Pub

M
a
t
h
u
r

O
C
T
4
Pub

M
a
t
h
u
r

N
A
N
O
G
Pub

B
o
y
e
r

O
C
T
4
Pub

B
o
y
e
r

N
A
N
O
G
Pub

B
o
y
e
r

S
O
X
2
Pub

J
i
n

O
C
T
4
Pub

J
u
n
g

O
C
T
4
Pub

L
i
s
t
e
r

S
O
X
2
Pub

L
i
s
t
e
r

K
L
F
4
Pub

L
i
s
t
e
r

T
A
F
1
Pub

L
i
s
t
e
r

p
3
0
0
Pub

L
i
s
t
e
r

N
A
N
O
G
Pub

L
i
s
t
e
r

O
C
T
4
Pub

L
o
h

O
C
T
4
Pub

L
o
h

N
A
N
O
G
Pub

M
a
s
u
i

S
O
X
2
Pub

S
h
a
r
o
v

O
C
T
4
Pub

I
v
a
n
o
v
a

N
A
N
O
G
Pub

S
h
a
r
o
v

N
A
N
O
G
Pub

W
a
l
k
e
r

O
C
T
4
Pub

W
a
l
k
e
r

S
O
X
2
Pub

B
a
b
a
i
e

O
C
T
4
Pub

G
r
e
b
e
r

O
C
T
4
Pub

G
r
e
b
e
r

N
A
N
O
G
Pub

G
r
e
b
e
r

S
O
X
2
Pub

G
r
e
b
e
r

F
G
F
2
Pub

G
r
e
b
e
r

B
M
P
4
Pub

G
r
e
b
e
r

A
C
T
A
Pub

J
u
n
g

G
A
D
D
4
5
G
Positive region from ChIP-chip or ChIP-PETGene expression up down
 
 
 
   
 
 
 
 
 
   
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
Input geneGene nameCHRstrandStartEnd
pou5f1 POU5F16-13113211531138451
POU domain, class 5, transcription factor 1 (Octamer-binding transcription factor 3)(Oct-3)(Oct-4) [Source:UniProtKB/Swiss-Prot;Acc:Q01860]
amazonia
iHOP
Pubmed
Omim
Uniprot
Ensembl
UCSC
 
 
   
 
 
 
 
 
 
 
 
     
 
 
 
 
 
 
 
 
Input geneGene nameCHRstrandStartEnd
sox2 SOX231181429722181432221
Transcription factor SOX-2 [Source:UniProtKB/Swiss-Prot;Acc:P48431]
amazonia
iHOP
Pubmed
Omim
Uniprot
Ensembl
UCSC
 
   
 
 
           
 
 
 
 
 
     
 
 
 
 
 
 
 
 
Input geneGene nameCHRstrandStartEnd
nanog NANOGP812179419957948655
Homeobox protein NANOG (Homeobox transcription factor Nanog)(hNanog) [Source:UniProtKB/Swiss-Prot;Acc:Q9H9S0]
amazonia
iHOP
Pubmed
Omim
Uniprot
Ensembl
UCSC


First paper covering ESCDb has been published in PlosOne May 22nd 2010

See A Data Integration Approach to Mapping OCT4 Gene Regulatory Networks Operative in Embryonic Stem Cells and Embryonal Carcinoma Cells by Jung & Peterson et al