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J. Reimand, T. Arak, J. Vilo: g:Profiler -- a web server for functional interpretation of gene lists (2011 update) Nucleic Acids Research 2011; doi: 10.1093/nar/gkr378 [PDF
Welcome to g:Sorter!
g:Sorter is a tool for gene expression similarity search. For a selected single gene, protein or probe ID, g:Sorter finds a number of most similar coexpressed (correlated) expression profiles in a specified dataset. Most dissimilar reversely expressed (anti-correlated) profiles may also be selected. A large collection of public gene expression datasets from ArrayExpress are available for analysis for a list of organisms.
The result of g:Sorter analysis is one or more sorted lists of microarray probesets. Several lists are retrieved when several probesets correspond to given input. g:Sorter also finds an intersection list that contains the common elements of all retrieved lists. All related lists can be passed on to functional profiling in g:GOSt and g:Cocoa.
For integrated gene co-expression query across many datasets, please visit our MEM tool
- Query 1: 50 probesets with most similar expression patterns to BRCA2 (Pearson correlation) in MAQC-II human breast cancer dataset (See also query to g:Cocoa).
- Query 2: Same as above, but retrieving both correlated and anti-correlated patterns (mirroring expression query).
- Query 3: Same as above, but but Excel Spreadsheet (XLS) produced as output (output format).