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J. Reimand, M. Kull, H. Peterson, J. Hansen, J. Vilo: g:Profiler -- a web-based toolset for functional profiling of gene lists from large-scale experiments (2007) NAR 35 W193-W200 [PDF]
J. Reimand, T. Arak, J. Vilo: g:Profiler -- a web server for functional interpretation of gene lists (2011 update) Nucleic Acids Research 2011; doi: 10.1093/nar/gkr378 [PDF]

About g:Profiler

g:Profiler is developed and maintained in Estonia, at the University of Tartu, Institute of Computer Science, Bioinformatics, Algorithmics and Data Mining Group BIIT. g:Profiler team consists of Dr. Jüri Reimand (currently at the Donnelly Centre, University of Toronto), Tambet Arak (active development, BIIT) and Prof. Jaak Vilo (principal investigator of BIIT). Over the time, g:Profiler has received valuable contributions from other BIIT members, notably Priit Adler, Jaanus Hansen, Raivo Kolde, Meelis Kull and Hedi Peterson. The first version of g:Profiler was known as GOSt (Gene Ontology Statistics) and become available in early 2005.

Publications and theses:

  • Jüri Reimand, Meelis Kull, Hedi Peterson, Jaanus Hansen, Jaak Vilo: g:Profiler — a web-based toolset for functional profiling of gene lists from large-scale experiments. (2007) Nucleic Acids Research 35 Web Server issue [PDF].
  • Jüri Reimand: Functional analysis of gene lists, networks and regulatory systems. (2010) Doctor of Philosophy (PhD) thesis, University of Tartu, Estonia. [PDF].
  • Jüri Reimand: Gene Ontology mining tool GOSt. (2006) Master of Science thesis, University of Tartu [PDF].

We acknowledge financial support from EU FP6 COBRED, ENFIN, ETF7437 MEM, EITSA, ERDF through EXCS funding projects. JR thanks M.Curie Biostar, and U.Agur and A.Lind foundations for fellowships. University of Tartu HPC centre has provided valuable computing resources.

Contact us:
Jüri Reimand & Jaak Vilo
Bioinformatics, Algorithmics, and Data Mining group BIIT
Institute of Computer Science
University of Tartu
Emails: { juri.reimand & jaak.vilo }@ut.ee
Address: Liivi 2-314, Tartu 50409, Estonia

Please use our online contact form or {biit.support}@ut.ee for technical questions and software support.

g:Profiler 2005-2016
Jüri Reimand & Tambet Arak & Jaak Vilo @ BIIT Group, Institute of Computer Science, University of Tartu, Estonia.
Please use the contact form for questions and support.