GraphWeb is a public web server for graph-based analysis of biological
networks that:
analyses directed and undirected, weighted and unweighted
heterogeneous networks of genes, proteins and microarray probesets for
many eukaryotic genomes;
integrates multiple diverse datasets into global networks;
incorporates multispecies data using gene orthology mapping;
filters nodes and edges based on dataset support, edge weight and
node annotation;
detects gene modules from networks using a collection of algorithms;
interprets discovered modules using Gene Ontology, pathways, and cis-regulatory
motifs.
J. Reimand*, L. Tooming*, H. Peterson, P. Adler, J. Vilo: GraphWeb: mining heterogeneous biological networks for gene modules with functional significance. (2008)
Nucl. Acids Res. 2008 36: W452-W459; doi:10.1093/nar/gkn230 [ PDF ]